********>Bugfix 20:
Author: Dave Case and Karl Kirschner
Date: 08/04/2004

Programs: glycam force field

Description: The glycam04EP.dat parameter file has frcmod-style headers for
             various sections, but these should not be there.

Fix:  apply the following patch to amber8/dat/leap/parm/glycam04EP.dat

------------------------------------------------------------------------------
*** glycam04EP.dat	14 Mar 2004 06:14:51 -0000	8.0
--- glycam04EP.dat	30 Jun 2004 13:49:02 -0000
***************
*** 1,5 ****
  GLYCAM PARAMETERS (FOR AMBER 8.0), COPYRIGHT R.J.WOODS, CCRC 2003
- MASS
  C      12.01     0.00        sp2 C carbonyl group
  CG     12.01     0.00        CG ALPHA ANOMERIC CARBON   (P94=PARM94)
  OH     16.00     0.00        OH HYDROXYL OXYGEN 
--- 1,4 ----
***************
*** 16,22 ****
  HW     1.008     0.00        H in TIP3P water
  EP     3.000     0.00        lone pair 
  
- BOND
  CG-CG    310.00     1.520      SCEE=1.0, SCNB=1.0 Butane (g, t) KNK
  CG-HC    360.00     1.095      SCEE=1.0, SCNB=1.0 Ethane KNK
  CG-H1    410.00     1.092      SCEE=1.0, SCNB=1.0 Methanol KNK
--- 15,20 ----
***************
*** 39,45 ****
  EP-OS    553.0      0.700
  EP-O     553.0      0.450
  
- ANGLE
  HC-CG-HC     40.00    109.50   SCEE=1.0, SCNB=1.0 Methane, Ethane KNK
  H1-CG-H1     45.00    109.50   SCEE=1.0, SCNB=1.0 Methanol, Propanol KNK
  H2-CG-H2     45.00    109.50   SCEE=1.0, SCNB=1.0 Methanol, Propanol KNK
--- 37,42 ----
***************
*** 93,99 ****
  EP-O -EP    150.00    120.0
  EP-O -C     150.00    120.0
  
- DIHE
  HC-CG-CG-HC   9           1.20           0.00           3.  SCEE=1.0, SCNB=1.0, Ethane Hs=0 charge KNK
  H1-CG-CG-HC   1           0.17           0.00           3.  SCEE=1.0, SCNB=1.0, Ethanol, after H1-CG-CG-CG KNK
  H2-CG-CG-HC   1           0.17           0.00           3.  SCEE=1.0, SCNB=1.0, Ethanol, after H1-CG-CG-CG KNK
--- 90,95 ----
***************
*** 160,165 ****
--- 156,162 ----
  H2-CG-C -O2   2           0.00           0.00           1.  SCEE=1.0, SCNB=1.0, 1_1_Dimethoxyacetate KNK
  OS-CG-C -O2   2           0.00           0.00           1.  SCEE=1.0, SCNB=1.0,
  CG-OS-CG-C    1           0.80           0.00           2.  SCEE=1.0, SCNB=1.0, 2-Methylpropanoate, 2-Methoxy-2-Methylpropanoate KNK
+ 
  X -X -N -H          1.00         180.          2.
  X -X -C -O          10.5         180.          2.
  X -X -N -CG         10.5         180.          2.
***************
*** 171,183 ****
  N   NA  N2  N*  NC  NB  N3  NP  NO
  C   C*  CA  CB  CC  CN  CM  CK  CQ  CW  CV  CR  CA  CX  CY  CD
  
! NONB      
    H           0.6000  0.0157            !Ferguson base pair geom.
    HO          0.0000  0.0000             OPLS Jorgensen, JACS,110,(1988),1657
    HC          1.4870  0.0157             OPLS
    H1          1.3870  0.0157             Veenstra et al JCC,8,(1992),963 
    H2          1.2870  0.0157             Veenstra et al JCC,8,(1992),963 
-   H3          1.1870  0.0157             Veenstra et al JCC,8,(1992),963 
    HW          0.0000  0.0000             TIP3P water model
    O           1.6612  0.2100             OPLS
    O2          1.6612  0.2100             OPLS
--- 168,179 ----
  N   NA  N2  N*  NC  NB  N3  NP  NO
  C   C*  CA  CB  CC  CN  CM  CK  CQ  CW  CV  CR  CA  CX  CY  CD
  
! MOD4      RE
    H           0.6000  0.0157            !Ferguson base pair geom.
    HO          0.0000  0.0000             OPLS Jorgensen, JACS,110,(1988),1657
    HC          1.4870  0.0157             OPLS
    H1          1.3870  0.0157             Veenstra et al JCC,8,(1992),963 
    H2          1.2870  0.0157             Veenstra et al JCC,8,(1992),963 
    HW          0.0000  0.0000             TIP3P water model
    O           1.6612  0.2100             OPLS
    O2          1.6612  0.2100             OPLS
------------------------------------------------------------------------------

Temporary workarounds: none.