This page contains tutorials on both the CPPTRAJ and
PYTRAJ programs, as listed on the index page.
TUTORIAL C0: An Introduction
This tutorial will give a basic introduction to using
for performing trajectory analysis. It will cover using
interactively and in batch mode for processing scripts, loading topologies
and trajectories, processing data, and working with data sets.
TUTORIAL C4: Combined Clustering Analysis with
This tutorial will cover how to perform combined clustering analysis with
CPPTRAJ, which is a way of comparing structure populations
between two or more independent trajectories or between different parts of a