================================================== Summary of pdb4amber for file 1fsc.pdb ================================================== ----------Chains The following (original) chains have been found: A ---------- Non-Standard Residues The following non-standard residue names in the original PDB file are not recognized by Amber and have been written to the separate file 1fsc_amb_nonprot.pdb UNL ---------- Histidines (Renumbered Residues!) It was not possible to determine the protonation state of the following HIS residues based on presence of hydrogens. Amber will consider them as HIE (epsilon-HIS) by default. If other protonation state desired change to HID (delta-HIS) or HIP (protonated HIS) by hand. HIS_29 HIS_6 ---------- Cysteines in Disulfide Bonds (Renumbered Residues!) CYS_3 - CYS_22: S-S distance = 1.982009 Ang. CYS_17 - CYS_39: S-S distance = 1.994242 Ang. CYS_41 - CYS_52: S-S distance = 2.017452 Ang. CYS_53 - CYS_59: S-S distance = 2.025811 Ang. The above CYS have been renamed to CYX in the new PDB file. Disulfide bond CONECT cards have been added to the new PDB file. ---------- Missing Heavy Atoms (Renumbered Residues!) None