Amber masthead
Filler image AmberTools21 Amber20 Manuals Tutorials Force Fields Contacts History
Filler image

Useful links:

Amber Home
Download Amber
Installation
Amber Citations
GPU Support
Updates
Mailing Lists
For Educators
File Formats
10.6 Jupyter Notebooks and Python

AMBER Tutorial

10.6.6 Real time molecular dynamics simulation and visualization

By Hai Nguyen (BSD 2-clause)

In [1]:
from __future__ import print_function
from time import gmtime, strftime
print('updated: ', strftime("%Y-%m-%d", gmtime()))

from IPython.display import Image
Image("images/real_time_md.png")
updated:  2016-06-12
Out[1]: