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Amber Reference Manuals

There is one combined Amber and AmberTools reference manual: 2018 Amber Reference Manual as an Acrobat (PDF) file (no HTML version is available).


  • The material in Section 18.6.2, titled "New in Amber16", actually refers to what is new in Amber18.
  • This version contains Chapter 24, on "Continous constant pH molecular dynamics", that was inadvertently left out of the version distributed with AmberTools18.
  • This version adds Yangdong Huang to the author list, for contributions to the continuous constant pH codes.

Older versions of the manuals are also available.

"How's that for maxed out?"

Last modified: Nov 21, 2018